STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM2E3 ubiquitin-protein ligase ZSWIM2. (634 aa)    
Predicted Functional Partners:
EBNA1BP2
EBNA1 binding protein 2.
      
 0.675
SLC66A1
Uncharacterized protein.
      
 0.589
CCDC146
Coiled-coil domain containing 146.
   
 
 0.577
CFAP52
Cilia-and flagella-associated protein 52 isoform X1.
      
 0.572
RSPH14
Radial spoke head 14 homolog.
      
 0.571
SLC35F1
Solute carrier family 35 member F1.
      
 0.566
CFAP74
Cilia and flagella associated protein 74.
      
 0.566
LRRC23
Leucine-rich repeat-containing protein 23 isoform a.
   
 
 0.553
TSNAXIP1
Translin-associated factor X-interacting protein 1 isoform a.
   
 
 0.552
LRRC46
Leucine rich repeat containing 46.
   
 
 0.529
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.