Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZSWIM2E3 ubiquitin-protein ligase ZSWIM2. (634 aa)    
Predicted Functional Partners:
LRFN4
Leucine-rich repeat and fibronectin type-III domain-containing protein 4 isoform X1.
    
   0.580
BCAM
Basal cell adhesion molecule (Lutheran blood group).
    
   0.565
CCDC146
Coiled-coil domain containing 146.
    
 
 0.556
TKTL2
Transketolase like 2.
   
 
 0.550
TKTL1
Transketolase-like protein 1.
   
 
 0.544
TKT
Transketolase.
   
 
 0.544
RNF151
Ring finger protein 151.
    
 
 0.540
TSNAXIP1
Translin-associated factor X-interacting protein 1 isoform a.
    
 
 0.533
EBNA1BP2
EBNA1 binding protein 2.
      
 0.531
RSPH14
Radial spoke head 14 homolog.
      
 0.531
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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