STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC150Coiled-coil domain containing 150. (1084 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor 3C polypeptide 3 isoform 1.
      
 0.831
SLC49A4
Solute carrier family 49 member 4.
      
 0.718
IQCK
IQ domain-containing protein K isoform 1.
      
 0.679
SEMA5B
Semaphorin 5B.
      
 0.649
DSCAM
DS cell adhesion molecule.
      
 0.584
CCDC77
Coiled-coil domain-containing protein 77 isoform a.
   
  
 0.575
C18orf54
Lung adenoma susceptibility protein 2 isoform X1.
      
 0.574
UBALD2
UBA like domain containing 2.
      
 0.573
CAMK2D
Calcium/calmodulin-dependent protein kinase type II subunit delta; Calcium/calmodulin-dependent protein kinase involved in the regulation of Ca(2+) homeostatis and excitation-contraction coupling (ECC) in heart by targeting ion channels, transporters and accessory proteins involved in Ca(2+) influx into the myocyte, Ca(2+) release from the sarcoplasmic reticulum (SR), SR Ca(2+) uptake and Na(+) and K(+) channel transport. Targets also transcription factors and signaling molecules to regulate heart function. In its activated form, is involved in the pathogenesis of dilated cardiomyopath [...]
      
 0.572
NEMP1
Nuclear envelope integral membrane protein 1 isoform a.
      
 0.571
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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