Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MOBKL3Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
STRN
Striatin isoform X1.
   
 
 0.897
CTTNBP2NL
CTTNBP2 N-terminal-like protein isoform X1.
    
 
 0.890
STRIP1
Striatin-interacting protein 1 isoform 1.
    
 
 0.887
PDCD10
Programmed cell death protein 10.
   
 
 0.887
STRN3
Striatin 3.
   
 
 0.873
STRIP2
Striatin interacting protein 2.
    
 
 0.866
STRN4
Striatin-4 isoform 2.
   
 
 0.864
FGFR1OP2
FGFR1 oncogene partner 2 isoform 1.
    
 
 0.859
SLMAP
Sarcolemmal membrane-associated protein isoform X2.
    
 
 0.854
STK26
Protein kinase domain-containing protein.
    
 
 0.849
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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