Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFAP65Cilia and flagella associated protein 65. (1837 aa)    
Predicted Functional Partners:
CFAP47
Uncharacterized protein.
    
 
 0.739
CFAP70
Cilia and flagella associated protein 70.
   
 0.737
CFAP69
Cilia-and flagella-associated protein 69 isoform 1.
    
 
 0.737
PLEKHA3
PH domain-containing protein.
      
 0.592
DLEC1
DLEC1 cilia and flagella associated protein.
   
  0.589
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
    
  0.589
SPAG16
Sperm associated antigen 16.
   
   0.584
SPATA17
Spermatogenesis associated 17.
   
   0.582
CCDC180
Coiled-coil domain containing 180.
    
  0.581
MAP1S
Microtubule-associated protein 1S isoform 1.
   
   0.575
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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