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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCA1IQ motif containing with AAA domain 1. (830 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein.
   
 
 0.830
WASHC5
WASH complex subunit 5 isoform X1.
      
 0.770
LRRC10
Leucine rich repeat containing 10.
    
 
 0.660
DAW1
WD_REPEATS_REGION domain-containing protein.
   
  
 0.610
CCDC149
Coiled-coil domain containing 149.
      
 0.575
CNRIP1
CB1 cannabinoid receptor-interacting protein 1 isoform CRIP1a.
      
 0.544
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.536
TEKT1
Tektin 1.
   
  
 0.533
CFAP58
Cilia-and flagella-associated protein 58.
   
  
 0.521
ULK4
Unc-51 like kinase 4.
   
  
 0.513
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.