STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHPF2Hexosyltransferase. (772 aa)    
Predicted Functional Partners:
HEPHL1
Hephaestin like 1; Belongs to the multicopper oxidase family.
      
 0.844
EXTL1
Exostosin like glycosyltransferase 1; Belongs to the glycosyltransferase 47 family.
      
 0.772
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
      
 0.764
MAN2C1
Mannosidase alpha class 2C member 1.
      
 0.672
BCAN
Brevican core protein isoform X1.
     
 0.609
B3GNT2
Hexosyltransferase.
      
 0.607
B3GALNT2
Hexosyltransferase.
      
 0.598
B3GALT2
Hexosyltransferase.
      
 0.577
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
      
 0.574
CHST1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.574
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.