STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUB1Negative regulator of ubiquitin like proteins 1. (616 aa)    
Predicted Functional Partners:
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.872
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.837
PSMD5
26S proteasome non-ATPase regulatory subunit 5 isoform 1.
     
 0.811
UBD
Uncharacterized protein.
    
 0.810
MCTP2
Multiple C2 and transmembrane domain-containing protein 2 isoform X3.
      
 0.763
PSME2
Proteasome activator complex subunit 2; Implicated in immunoproteasome assembly and required for efficient antigen processing. The PA28 activator complex enhances the generation of class I binding peptides by altering the cleavage pattern of the proteasome (By similarity).
     
 0.757
AIPL1
Aryl hydrocarbon receptor interacting protein like 1.
    
 
 0.717
FBXO24
F-box protein 24.
      
 0.685
ANO4
Anoctamin.
      
 0.675
CASKIN2
CASK interacting protein 2.
    
 
 0.673
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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