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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRSS2Putative trypsinogen; Belongs to the peptidase S1 family. (247 aa)    
Predicted Functional Partners:
LOC100302368
Trypsin.
  
  
0.901
SPINK1
Serine protease inhibitor Kazal-type 1; Serine protease inhibitor which exhibits anti-trypsin activity. In the pancreas, protects against trypsin- catalyzed premature activation of zymogens (By similarity).
   
 
 0.863
LOC100739735
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
0.850
LOC100621820
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
0.849
APP
Gamma-secretase C-terminal fragment 50; Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those medi [...]
 
  
 
 0.840
ELANE
Elastase, neutrophil expressed; Belongs to the peptidase S1 family.
  
  
0.832
MMP8
Matrix metallopeptidase 8.
   
 0.808
LOC100520832
C-type lectin domain-containing protein.
   
 0.772
REG3G
Lithostathine A chain; Might act as an inhibitor of spontaneous calcium carbonate precipitation.
   
 0.772
MMP13
Matrix metallopeptidase 13.
   
 0.760
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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