STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDFICMyoD family inhibitor domain containing. (242 aa)    
Predicted Functional Partners:
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.600
SNTG1
Gamma-1-syntrophin isoform 1.
      
 0.541
POU3F1
POU domain protein.
      
 0.537
NRIP1
Nuclear receptor-interacting protein 1 isoform X1.
      
 0.531
OR52N5
Olfactory receptor.
      
 0.515
CDC37
CDC37 cell division cycle 37 protein.
      
 0.497
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
      
 0.483
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
  
 0.478
SLC25A17
Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.471
ZNF423
Zinc finger protein 423 isoform X2.
    
 
 0.471
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.