STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA3Homeobox protein Hox-A3 isoform a. (443 aa)    
Predicted Functional Partners:
HOXA5
Homeobox domain-containing protein.
   
  
0.721
HOXA4
Homeobox domain-containing protein.
   
  
0.714
HOXA2
Homeobox protein Hox-A2.
   
  
0.692
PAX1
Paired box 1.
    
 
 0.685
FOXN1
Forkhead box N1.
    
 
 0.671
HOXA7
Homeobox A7.
   
  
0.639
FAM216B
Family with sequence similarity 216 member B.
      
 0.582
ABHD16B
Abhydrolase domain containing 16B.
      
 0.541
PAX9
Paired box 9.
    
 
 0.537
EYA1
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
    
 
 0.515
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.