STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD55Ankyrin repeat domain-containing protein 55 isoform X2. (613 aa)    
Predicted Functional Partners:
LRATD1
LRAT domain containing 1.
      
 0.756
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.719
VSTM5
V-set and transmembrane domain containing 5.
      
 0.659
CLHC1
Clathrin heavy chain linker domain-containing protein 1.
    
 
 0.601
ZDHHC19
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.596
IFT46
Intraflagellar transport 46.
    
 
 0.593
LUZP2
Leucine zipper protein 2.
      
 0.590
IFT74
Intraflagellar transport 74.
    
 
 0.582
GREB1
Uncharacterized protein.
      
 0.578
AKAP8
A-kinase anchoring protein 8; Belongs to the AKAP95 family.
    
 
 0.577
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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