STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS6A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X1. (1117 aa)    
Predicted Functional Partners:
PPWD1
Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform 1.
   
  
 0.798
CENPK
Centromere protein K.
   
  
 0.701
NRSN2
Neurensin 2.
      
 0.691
TPD52L3
TPD52 like 3.
      
 0.611
SUSD5
Sushi domain containing 5.
      
 0.611
GLT8D2
Glycosyltransferase 8 domain-containing protein 2 isoform X1.
      
 0.611
B3GLCT
Beta-1,3-glucosyltransferase.
    
 0.598
ARHGEF4
Rho guanine nucleotide exchange factor 4.
   
  
 0.575
CDHR5
Cadherin related family member 5.
   
 
 0.573
CEACAM16
Carcinoembryonic antigen related cell adhesion molecule 16.
   
  
 0.568
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.