STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX4Chromobox 4. (547 aa)    
Predicted Functional Partners:
BMI1
RING-type domain-containing protein.
    
 0.929
RING1
Ring finger protein 1.
    
 0.914
RNF2
Ring finger protein 2.
    
 0.898
PCGF2
Polycomb group RING finger protein 2 isoform X1.
    
 0.896
PHC1
Uncharacterized protein.
    
 0.892
CBX8
Uncharacterized protein.
    
 0.882
YAF2
YY1 associated factor 2.
    
 0.846
PHC3
Polyhomeotic-like protein 3 isoform X1.
    
 0.841
PCGF3
Polycomb group ring finger 3.
    
 0.827
CBX2
Chromobox protein homolog 2 isoform X1.
  
 
0.823
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.