Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CALB1 | GFAP | ENSSSCP00000006534 | ENSSSCP00000018375 | Calbindin 1. | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | 0.772 |
CALB1 | GSX2 | ENSSSCP00000006534 | ENSSSCP00000009428 | Calbindin 1. | GS homeobox 2. | 0.446 |
CALB1 | PPP1R1B | ENSSSCP00000006534 | ENSSSCP00000065477 | Calbindin 1. | Protein phosphatase 1 regulatory subunit 1B; Inhibitor of protein-phosphatase 1. | 0.555 |
CALB1 | PVALB | ENSSSCP00000006534 | ENSSSCP00000044894 | Calbindin 1. | Parvalbumin alpha; Belongs to the parvalbumin family. | 0.926 |
CALB1 | TH | ENSSSCP00000006534 | ENSSSCP00000047958 | Calbindin 1. | Tyrosine hydroxylase. | 0.858 |
DOC2B | PPP1R1B | ENSSSCP00000055973 | ENSSSCP00000065477 | Double C2-like domain-containing protein. | Protein phosphatase 1 regulatory subunit 1B; Inhibitor of protein-phosphatase 1. | 0.515 |
DRD1 | DRD2 | ENSSSCP00000020447 | ENSSSCP00000049999 | D(1A) dopamine receptor; Dopamine receptor whose activity is mediated by G proteins which activate adenylyl cyclase. | Dopamine receptor D2; Belongs to the G-protein coupled receptor 1 family. | 0.417 |
DRD1 | GSX2 | ENSSSCP00000020447 | ENSSSCP00000009428 | D(1A) dopamine receptor; Dopamine receptor whose activity is mediated by G proteins which activate adenylyl cyclase. | GS homeobox 2. | 0.404 |
DRD1 | PPP1R1B | ENSSSCP00000020447 | ENSSSCP00000065477 | D(1A) dopamine receptor; Dopamine receptor whose activity is mediated by G proteins which activate adenylyl cyclase. | Protein phosphatase 1 regulatory subunit 1B; Inhibitor of protein-phosphatase 1. | 0.642 |
DRD1 | TH | ENSSSCP00000020447 | ENSSSCP00000047958 | D(1A) dopamine receptor; Dopamine receptor whose activity is mediated by G proteins which activate adenylyl cyclase. | Tyrosine hydroxylase. | 0.409 |
DRD2 | DRD1 | ENSSSCP00000049999 | ENSSSCP00000020447 | Dopamine receptor D2; Belongs to the G-protein coupled receptor 1 family. | D(1A) dopamine receptor; Dopamine receptor whose activity is mediated by G proteins which activate adenylyl cyclase. | 0.417 |
DRD2 | PPP1R1B | ENSSSCP00000049999 | ENSSSCP00000065477 | Dopamine receptor D2; Belongs to the G-protein coupled receptor 1 family. | Protein phosphatase 1 regulatory subunit 1B; Inhibitor of protein-phosphatase 1. | 0.612 |
DRD2 | TH | ENSSSCP00000049999 | ENSSSCP00000047958 | Dopamine receptor D2; Belongs to the G-protein coupled receptor 1 family. | Tyrosine hydroxylase. | 0.522 |
GFAP | CALB1 | ENSSSCP00000018375 | ENSSSCP00000006534 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Calbindin 1. | 0.772 |
GFAP | HTT | ENSSSCP00000018375 | ENSSSCP00000009271 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Huntingtin. | 0.738 |
GFAP | PPP1R1B | ENSSSCP00000018375 | ENSSSCP00000065477 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Protein phosphatase 1 regulatory subunit 1B; Inhibitor of protein-phosphatase 1. | 0.544 |
GFAP | PVALB | ENSSSCP00000018375 | ENSSSCP00000044894 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Parvalbumin alpha; Belongs to the parvalbumin family. | 0.668 |
GFAP | TH | ENSSSCP00000018375 | ENSSSCP00000047958 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Tyrosine hydroxylase. | 0.830 |
GSX2 | CALB1 | ENSSSCP00000009428 | ENSSSCP00000006534 | GS homeobox 2. | Calbindin 1. | 0.446 |
GSX2 | DRD1 | ENSSSCP00000009428 | ENSSSCP00000020447 | GS homeobox 2. | D(1A) dopamine receptor; Dopamine receptor whose activity is mediated by G proteins which activate adenylyl cyclase. | 0.404 |
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