STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD13BAnkyrin repeat domain 13B. (840 aa)    
Predicted Functional Partners:
TMEM25
Transmembrane protein 25.
      
 0.808
EML1
EMAP like 1.
      
 0.649
SEZ6L2
Seizure related 6 homolog like 2.
    
 
 0.643
PIP5KL1
Phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform 1.
      
 0.587
PLPPR3
Phospholipid phosphatase-related protein type 3 isoform 2.
      
 0.587
GPR61
Putative G-protein coupled receptor 61; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.574
NPTX1
Neuronal pentraxin 1.
      
 0.571
PICK1
Protein interacting with PRKCA 1.
      
 0.571
PLPPR4
Phospholipid phosphatase-related protein type 4 isoform 1.
      
 0.569
EXOC8
Exocyst complex component 8.
      
 0.565
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.