STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF287Zinc finger protein 287 isoform X1. (760 aa)    
Predicted Functional Partners:
UTP3
Sas10 domain-containing protein.
      
 0.563
PUS3
tRNA pseudouridine(38/39) synthase isoform 1.
      
 0.553
CETN3
Centrin 3.
    
 
 0.531
GTF2H1
General transcription factor IIH subunit 1.
    
 
 0.519
MTO1
Mitochondrial tRNA translation optimization 1.
      
 0.503
HNRNPK
Uncharacterized protein.
   
 
 0.485
ZNF827
Zinc finger protein 827.
      
0.468
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.