STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD2C2 calcium dependent domain containing 2. (709 aa)    
Predicted Functional Partners:
TRDMT1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.787
TM2D1
TM2 domain containing 1.
      
 0.777
RCAN3
Calcipressin-3 isoform 1.
      
 0.729
FAM92A
Family with sequence similarity 92 member A.
      
 0.723
ENDOD1
Endonuclease domain containing 1.
      
 0.659
FBXO4
F-box only protein 4.
      
 0.572
MAN2C1
Mannosidase alpha class 2C member 1.
      
 0.548
ARHGAP10
Rho GTPase-activating protein 10.
    
   0.547
ZNF543
Zinc finger protein 264.
      
 0.527
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
      
 0.525
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.