ABCA8 protein (Sus scrofa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ABCA8

ATP binding cassette subfamily A member 8. (1589 aa)

Predicted Functional Partners:

KCNJ16

0.610

ABCF3

0.579

LOC100522455

0.504

UBXN11

0.504

LOC100522267

0.475

ABCB5

0.475

ABCD4

0.472

ABCC3

0.447

VSIG10L

0.445

ABCF1

0.434

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA8	ABCB5	ENSSSCP00000020695	ENSSSCP00000070717	ATP binding cassette subfamily A member 8.	ATP binding cassette subfamily B member 5.	0.475
ABCA8	ABCC3	ENSSSCP00000020695	ENSSSCP00000071284	ATP binding cassette subfamily A member 8.	ATP binding cassette subfamily C member 3.	0.447
ABCA8	ABCD4	ENSSSCP00000020695	ENSSSCP00000051619	ATP binding cassette subfamily A member 8.	ATP binding cassette subfamily D member 4.	0.472
ABCA8	ABCF1	ENSSSCP00000020695	ENSSSCP00000028530	ATP binding cassette subfamily A member 8.	ATP-binding cassette sub-family F member 1; Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis (By similarity); Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.	0.434
ABCA8	ABCF3	ENSSSCP00000020695	ENSSSCP00000021222	ATP binding cassette subfamily A member 8.	ATP-binding cassette sub-family F member 3 isoform 1.	0.579
ABCA8	KCNJ16	ENSSSCP00000020695	ENSSSCP00000070452	ATP binding cassette subfamily A member 8.	Potassium voltage-gated channel subfamily J member 16.	0.610
ABCA8	LOC100522267	ENSSSCP00000020695	ENSSSCP00000016316	ATP binding cassette subfamily A member 8.	Uncharacterized protein.	0.475
ABCA8	LOC100522455	ENSSSCP00000020695	ENSSSCP00000042243	ATP binding cassette subfamily A member 8.	Uncharacterized protein.	0.504
ABCA8	UBXN11	ENSSSCP00000020695	ENSSSCP00000043497	ATP binding cassette subfamily A member 8.	UBX domain protein 11.	0.504
ABCA8	VSIG10L	ENSSSCP00000020695	ENSSSCP00000058017	ATP binding cassette subfamily A member 8.	V-set and immunoglobulin domain containing 10 like.	0.445
ABCB5	ABCA8	ENSSSCP00000070717	ENSSSCP00000020695	ATP binding cassette subfamily B member 5.	ATP binding cassette subfamily A member 8.	0.475
ABCB5	LOC100522267	ENSSSCP00000070717	ENSSSCP00000016316	ATP binding cassette subfamily B member 5.	Uncharacterized protein.	0.417
ABCB5	LOC100522455	ENSSSCP00000070717	ENSSSCP00000042243	ATP binding cassette subfamily B member 5.	Uncharacterized protein.	0.416
ABCC3	ABCA8	ENSSSCP00000071284	ENSSSCP00000020695	ATP binding cassette subfamily C member 3.	ATP binding cassette subfamily A member 8.	0.447
ABCC3	ABCF3	ENSSSCP00000071284	ENSSSCP00000021222	ATP binding cassette subfamily C member 3.	ATP-binding cassette sub-family F member 3 isoform 1.	0.677
ABCD4	ABCA8	ENSSSCP00000051619	ENSSSCP00000020695	ATP binding cassette subfamily D member 4.	ATP binding cassette subfamily A member 8.	0.472
ABCD4	ABCF1	ENSSSCP00000051619	ENSSSCP00000028530	ATP binding cassette subfamily D member 4.	ATP-binding cassette sub-family F member 1; Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis (By similarity); Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.	0.431
ABCD4	ABCF3	ENSSSCP00000051619	ENSSSCP00000021222	ATP binding cassette subfamily D member 4.	ATP-binding cassette sub-family F member 3 isoform 1.	0.813
ABCF1	ABCA8	ENSSSCP00000028530	ENSSSCP00000020695	ATP-binding cassette sub-family F member 1; Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis (By similarity); Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.	ATP binding cassette subfamily A member 8.	0.434
ABCF1	ABCD4	ENSSSCP00000028530	ENSSSCP00000051619	ATP-binding cassette sub-family F member 1; Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis (By similarity); Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.	ATP binding cassette subfamily D member 4.	0.431