STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPPA2Developmental pluripotency associated 2. (311 aa)    
Predicted Functional Partners:
ZSCAN4
Uncharacterized protein.
      
 0.764
DPPA5
Developmental pluripotency-associated 5 protein.
   
  
 0.717
UTF1
Uncharacterized protein.
      
 0.666
NANOG
Homeobox domain-containing protein.
   
  
 0.628
ESRRB
Estrogen related receptor beta.
      
 0.600
TMEM154
Transmembrane protein 154.
      
 0.588
POU5F1
POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency. Belongs to the POU transcription factor family. Class-5 subfamily.
   
  
 0.574
ZFP42
ZFP42 zinc finger protein.
   
  
 0.562
PIAS4
Protein inhibitor of activated STAT 4.
      
 0.562
PRDM14
PR/SET domain 14.
      
 0.560
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.