STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN4Peptidyl-prolyl cis-trans isomerase. (131 aa)    
Predicted Functional Partners:
KIN
Kin17 DNA and RNA binding protein.
 
      0.837
WDR48
WD repeat domain 48.
 
      0.828
YIPF6
Protein YIPF.
   
  
 0.783
CHIC1
Cysteine rich hydrophobic domain 1.
      
 0.779
ZMYM3
Uncharacterized protein.
    
 
 0.765
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
   
  
 0.742
TAF9B
Transcription initiation factor TFIID subunit 9B.
   
  
 0.733
SH3BGRL
Uncharacterized protein.
   
  
 0.670
ABCF1
ATP-binding cassette sub-family F member 1; Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis (By similarity); Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.
 
 
 
 0.646
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.593
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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