STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF14PHD finger protein 14. (953 aa)    
Predicted Functional Partners:
ZNF404
Zinc finger protein 404.
      
 0.813
ZNF618
Zinc finger protein 618.
      
 0.806
RNF150
Ring finger protein 150.
      
 0.729
CBX8
Uncharacterized protein.
      
 0.682
ZFP64
ZFP64 zinc finger protein.
      
 0.681
TIMELESS
Timeless circadian regulator.
      
 0.604
THSD7A
Thrombospondin type 1 domain containing 7A.
      
 0.601
BRPF1
Uncharacterized protein.
   
 
0.590
BRD1
Bromodomain containing 1.
   
 
0.590
BRPF3
Bromodomain and PHD finger containing 3.
   
 
0.590
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.