STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGLYRP2N-acetylmuramoyl-L-alanine amidase; May play a scavenger role by digesting biologically active peptidoglycan (PGN) into biologically inactive fragments. Has no direct bacteriolytic activity. (598 aa)    
Predicted Functional Partners:
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
   
 
 0.812
PIGS
Phosphatidylinositol glycan anchor biosynthesis class S.
   
 
 0.812
PIGK
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein (By similarity).
    
 
 0.796
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
   
 
 0.759
SUSD4
Sushi domain containing 4.
      
 0.648
GCSAM
Uncharacterized protein.
      
 0.648
SLC14A1
Urea transporter; Belongs to the urea transporter family.
      
 0.548
F13B
Coagulation factor XIII B chain.
   
  
 0.542
CCDC3
Coiled-coil domain containing 3.
      
 0.516
PIK3AP1
Phosphoinositide-3-kinase adaptor protein 1.
      
 0.516
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.