STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBX1Ladybird homeobox 1. (281 aa)    
Predicted Functional Partners:
PIK3IP1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.509
NOS1
Nitric oxide synthase 1.
      
 0.509
CSRP2
Cysteine and glycine rich protein 2.
      
 0.507
SIX4
Homeobox domain-containing protein.
   
  
 0.505
MTM1
Myotubularin isoform X3.
      
 0.487
FHOD1
Formin homology 2 domain containing 1.
      
 0.455
MEF2A
Myocyte-specific enhancer factor 2A; Transcriptional activator which binds specifically to the MEF2 element, 5'-YTA[AT](4)TAR-3', found in numerous muscle-specific genes. Also involved in the activation of numerous growth factor- and stress-induced genes. Mediates cellular functions not only in skeletal and cardiac muscle development, but also in neuronal differentiation and survival. Plays diverse roles in the control of cell growth, survival and apoptosis via p38 MAPK signaling in muscle-specific and/or growth factor-related transcription. In cerebellar granule neurons, phosphorylate [...]
      
 0.454
MBNL1
Muscleblind like splicing regulator 1.
      
 0.454
MYL1
Uncharacterized protein.
   
 
 0.431
HIF1AN
Hypoxia inducible factor 1 subunit alpha inhibitor.
      
 0.424
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.