STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNL1Cyclin-L1 isoform 1; Belongs to the cyclin family. (526 aa)    
Predicted Functional Partners:
PRX
Periaxin.
      
 0.726
ID3
BHLH domain-containing protein.
      
 0.723
DUSP8
Dual specificity phosphatase 8.
      
 0.698
ZNF276
Zinc finger protein 276 isoform a.
   
  
 0.680
DUSP16
Dual specificity phosphatase 16.
      
 0.647
CDK9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.645
CDK13
Cyclin dependent kinase 13.
      
 0.645
CDK10
Cyclin dependent kinase 10; Belongs to the protein kinase superfamily.
   
 
 0.644
MAPK7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
      
 0.641
EGR4
Uncharacterized protein.
      
 0.635
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.