STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMHD1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (627 aa)    
Predicted Functional Partners:
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.973
APOBEC3B
Uncharacterized protein.
   
  
 0.843
SERINC5
Serine incorporator 5.
      
 0.773
APOB
Apolipoprotein B-100.
      
 0.712
SERINC3
Serine incorporator 3.
   
  
 0.706
RNASEH2C
Ribonuclease H2 subunit C.
      
 0.703
RNASEH2A
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
      
 0.702
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 
 0.700
TREX1
Three prime repair exonuclease 1.
   
  
 0.658
TRIM22
Tripartite motif containing 22.
   
 
 0.630
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.