STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FTSJ1Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (368 aa)    
Predicted Functional Partners:
WDR6
WD repeat domain 6.
   
 
 0.979
SLCO1A2
Solute carrier organic anion transporter family member.
   
  
 0.907
TBC1D25
TBC1 domain family member 25 isoform c.
      
 0.902
RUBCNL
Rubicon like autophagy enhancer.
   
    0.899
CWC25
Pre-mRNA-splicing factor CWC25 homolog.
   
    0.887
ACOT11
Acyl-CoA thioesterase 11.
   
    0.887
C1orf109
Chromosome 1 open reading frame 109.
   
    0.887
EBPL
EBP like.
      
 0.860
WDR13
WD repeat domain 13.
    
 
 0.852
PGM2
Phosphoglucomutase 2.
  
  
 0.835
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.