STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC34Leucine rich repeat containing 34. (464 aa)    
Predicted Functional Partners:
MYNN
Myoneurin isoform X1.
      
 0.872
INSYN2B
Inhibitory synaptic factor family member 2B.
   
 
 0.703
DNPEP
Aspartyl aminopeptidase.
      
 0.658
DAZAP1
DAZ associated protein 1.
      
 0.588
CCDC65
Coiled-coil domain containing 65.
   
 
 0.585
PDHA1
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and thereby links the glycolytic pathway to the tricarboxylic cycle.
   
  
 0.577
RSPH14
Radial spoke head 14 homolog.
   
 
 0.575
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.574
CFAP52
Cilia-and flagella-associated protein 52 isoform X1.
   
 
 0.558
EGFL6
EGF like domain multiple 6.
    
 
 0.554
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.