STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSCN1Fascin. (465 aa)    
Predicted Functional Partners:
WDR74
Uncharacterized protein.
      
 0.558
SNX15
Sorting nexin 15.
      
 0.558
VASP
Vasodilator stimulated phosphoprotein.
   
  
 0.525
POLR2F
RNA polymerase II subunit F.
      
 0.523
CTNNB1
Catenin beta 1.
   
 
 0.518
PAPLN
Papilin, proteoglycan like sulfated glycoprotein.
      
 0.517
PRR16
Protein Largen isoform X1.
      
 0.514
DYNC1I2
WD_REPEATS_REGION domain-containing protein.
   
  
 0.513
IQCJ
IQ motif containing J.
      
 0.506
DENND6B
Protein DENND6B isoform X1.
      
 0.506
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.