STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL8Oxysterol-binding protein; Belongs to the OSBP family. (889 aa)    
Predicted Functional Partners:
LOC100154179
Golgi pH regulator A isoform 1.
 
      0.849
SMCO2
Single-pass membrane protein with coiled-coil domains 2.
      
 0.780
MROH9
Maestro heat like repeat family member 9.
   
  
 0.730
ESYT2
Extended synaptotagmin 2.
   
 
 0.671
ASAH2
Neutral ceramidase.
      
 0.665
IFRD2
Interferon-related developmental regulator 2.
      
 0.661
MBLAC2
Metallo-beta-lactamase domain containing 2.
      
 0.654
GBE1
1,4-alpha-glucan branching enzyme 1.
      
 0.652
ZRANB2
Zinc finger Ran-binding domain-containing protein 2; Splice factor required for alternative splicing of TRA2B/SFRS10 transcripts. May interfere with constitutive 5'-splice site selection (By similarity); Belongs to the ZRANB2 family.
      
 0.643
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
      
 0.616
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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