STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2. (316 aa)    
Predicted Functional Partners:
UBXN1
UBX domain protein 1.
   
 
 0.963
FAF1
Fas associated factor 1.
    
 
 0.960
UBXN7
UBX domain-containing protein.
    
 
 0.956
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.877
KCTD10
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform 2.
  
 
0.853
KCTD13
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1.
  
 
 
0.853
DIMT1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
      
 0.779
SCARA3
Scavenger receptor class A member 3 isoform X1.
    
 
 0.761
RND2
Rho family GTPase 2.
    
 0.690
KCTD17
Potassium channel tetramerization domain containing 17.
     
0.660
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.