STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100621260START domain-containing protein. (215 aa)    
Predicted Functional Partners:
ACOT9
Acyl-CoA thioesterase 9.
      
 0.712
HLF
HLF transcription factor, PAR bZIP family member.
      
 0.670
USHBP1
USH1 protein network component harmonin binding protein 1.
      
 0.609
TRA2B
Transformer 2 beta homolog.
      
 0.608
ZBTB25
Zinc finger and BTB domain-containing protein 25 isoform X4.
      
 0.530
STARD10
StAR related lipid transfer domain containing 10.
      
0.518
COX11
Cytochrome c oxidase copper chaperone COX11.
      
 0.510
STXBP4
Syntaxin-binding protein 4 isoform X3.
      
 0.505
MTTP
Microsomal triglyceride transfer protein large subunit; Catalyzes the transport of triglyceride, cholesteryl ester, and phospholipid between phospholipid surfaces. Required for the secretion of plasma lipoproteins that contain apolipoprotein B.
      
 0.497
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.483
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.