Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYLD | I3LND9_PIG | ENSSSCP00000041575 | ENSSSCP00000025613 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.900 |
CYLD | IKBKG | ENSSSCP00000041575 | ENSSSCP00000048392 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | NF-kappa-B essential modulator; Regulatory subunit of the IKK core complex which phosphorylates inhibitors of NF-kappa-B thus leading to the dissociation of the inhibitor/NF-kappa-B complex and ultimately the degradation of the inhibitor. Its binding to scaffolding polyubiquitin seems to play a role in IKK activation by multiple signaling receptor pathways. However, the specific type of polyubiquitin recognized upon cell stimulation (either 'Lys-63'-linked or linear polyubiquitin) and its functional importance is reported conflictingly. Also considered to be a mediator for TAX activati [...] | 0.968 |
CYLD | OTULIN | ENSSSCP00000041575 | ENSSSCP00000065867 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | OTU deubiquitinase with linear linkage specificity. | 0.776 |
CYLD | RBCK1 | ENSSSCP00000041575 | ENSSSCP00000007674 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1. | 0.690 |
CYLD | SHARPIN | ENSSSCP00000041575 | ENSSSCP00000006323 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | SHANK associated RH domain interactor. | 0.844 |
CYLD | TBK1 | ENSSSCP00000041575 | ENSSSCP00000046241 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | TANK binding kinase TBK1. | 0.810 |
CYLD | TNFRSF1A | ENSSSCP00000041575 | ENSSSCP00000035606 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | Tumor necrosis factor receptor superfamily member 1A; Receptor for TNFSF2/TNF-alpha and homotrimeric TNFSF1/lymphotoxin-alpha. The adapter molecule FADD recruits caspase-8 to the activated receptor. The resulting death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation which initiates the subsequent cascade of caspases (aspartate-specific cysteine proteases) mediating apoptosis (By similarity). | 0.986 |
CYLD | UBC | ENSSSCP00000041575 | ENSSSCP00000062692 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] | 0.858 |
CYLD | UBE2L3 | ENSSSCP00000041575 | ENSSSCP00000065727 | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.516 |
I3LND9_PIG | CYLD | ENSSSCP00000025613 | ENSSSCP00000041575 | Uncharacterized protein. | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | 0.900 |
I3LND9_PIG | IKBKG | ENSSSCP00000025613 | ENSSSCP00000048392 | Uncharacterized protein. | NF-kappa-B essential modulator; Regulatory subunit of the IKK core complex which phosphorylates inhibitors of NF-kappa-B thus leading to the dissociation of the inhibitor/NF-kappa-B complex and ultimately the degradation of the inhibitor. Its binding to scaffolding polyubiquitin seems to play a role in IKK activation by multiple signaling receptor pathways. However, the specific type of polyubiquitin recognized upon cell stimulation (either 'Lys-63'-linked or linear polyubiquitin) and its functional importance is reported conflictingly. Also considered to be a mediator for TAX activati [...] | 0.983 |
I3LND9_PIG | OTULIN | ENSSSCP00000025613 | ENSSSCP00000065867 | Uncharacterized protein. | OTU deubiquitinase with linear linkage specificity. | 0.983 |
I3LND9_PIG | RBCK1 | ENSSSCP00000025613 | ENSSSCP00000007674 | Uncharacterized protein. | RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1. | 0.996 |
I3LND9_PIG | SHARPIN | ENSSSCP00000025613 | ENSSSCP00000006323 | Uncharacterized protein. | SHANK associated RH domain interactor. | 0.995 |
I3LND9_PIG | STAT1 | ENSSSCP00000025613 | ENSSSCP00000033087 | Uncharacterized protein. | Signal transducer and activator of transcription 1; Signal transducer and transcription activator that mediates cellular responses to interferons (IFNs), cytokine KITLG/SCF and other cytokines and other growth factors. Following type I IFN (IFN-alpha and IFN-beta) binding to cell surface receptors, signaling via protein kinases leads to activation of Jak kinases (TYK2 and JAK1) and to tyrosine phosphorylation of STAT1 and STAT2. The phosphorylated STATs dimerize and associate with ISGF3G/IRF-9 to form a complex termed ISGF3 transcription factor, that enters the nucleus. ISGF3 binds to [...] | 0.884 |
I3LND9_PIG | TBK1 | ENSSSCP00000025613 | ENSSSCP00000046241 | Uncharacterized protein. | TANK binding kinase TBK1. | 0.976 |
I3LND9_PIG | TNFRSF1A | ENSSSCP00000025613 | ENSSSCP00000035606 | Uncharacterized protein. | Tumor necrosis factor receptor superfamily member 1A; Receptor for TNFSF2/TNF-alpha and homotrimeric TNFSF1/lymphotoxin-alpha. The adapter molecule FADD recruits caspase-8 to the activated receptor. The resulting death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation which initiates the subsequent cascade of caspases (aspartate-specific cysteine proteases) mediating apoptosis (By similarity). | 0.979 |
I3LND9_PIG | UBC | ENSSSCP00000025613 | ENSSSCP00000062692 | Uncharacterized protein. | Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] | 0.845 |
I3LND9_PIG | UBE2L3 | ENSSSCP00000025613 | ENSSSCP00000065727 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.842 |
IKBKG | CYLD | ENSSSCP00000048392 | ENSSSCP00000041575 | NF-kappa-B essential modulator; Regulatory subunit of the IKK core complex which phosphorylates inhibitors of NF-kappa-B thus leading to the dissociation of the inhibitor/NF-kappa-B complex and ultimately the degradation of the inhibitor. Its binding to scaffolding polyubiquitin seems to play a role in IKK activation by multiple signaling receptor pathways. However, the specific type of polyubiquitin recognized upon cell stimulation (either 'Lys-63'-linked or linear polyubiquitin) and its functional importance is reported conflictingly. Also considered to be a mediator for TAX activati [...] | CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. | 0.968 |
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