STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPH6Diphthamine biosynthesis 6. (310 aa)    
Predicted Functional Partners:
DPH5
Diphthine methyl ester synthase isoform a.
  
 
 0.933
EEF2
Eukaryotic translation elongation factor 2.
    
 0.844
PARP4
Poly [ADP-ribose] polymerase.
      
 0.698
DPH1
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
      
 0.677
UHRF1BP1
UHRF1 binding protein 1.
      
 0.651
UBAP2
Ubiquitin associated protein 2.
      
 0.619
BBX
BBX high mobility group box domain containing.
      
 0.592
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.583
ZMYM2
Zinc finger MYM-type containing 2.
    
 
 0.581
FBXO4
F-box only protein 4.
      
 0.572
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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