STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC96Coiled-coil domain-containing protein 96. (555 aa)    
Predicted Functional Partners:
CFAP70
Cilia and flagella associated protein 70.
   
 
 0.806
CCDC146
Coiled-coil domain containing 146.
   
 
 0.792
CCDC13
Uncharacterized protein.
   
  
 0.775
CCDC81
Coiled-coil domain containing 81.
      
 0.773
DNAH10
Dynein axonemal heavy chain 10.
    
 
 0.761
CFAP44
Cilia and flagella associated protein 44.
    
 
 0.760
DNALI1
Dynein axonemal light intermediate chain 1.
   
  
 0.732
DRC7
Dynein regulatory complex subunit 7 isoform a.
      
 0.731
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.702
CCDC33
Coiled-coil domain containing 33.
   
 
 0.696
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.