STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBPL1TATA-box binding protein like 1. (206 aa)    
Predicted Functional Partners:
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.921
XBP1
BZIP domain-containing protein.
   
 
 0.915
TBP
Uncharacterized protein.
   
  0.910
SP1
Transcription factor Sp1 isoform a.
    
 0.906
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
  0.905
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
  0.905
MYOD1
Myoblast determination protein 1; Acts as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. Together with MYF5 and MYOG, co-occupies muscle-specific gene promoter core region during myogenesis. Induces fibroblasts to differentiate into myoblasts. Interacts with and is inhibited by the twist protein. This interaction probably involves the basic domains of both proteins (By similarity).
    
 0.903
GTF2B
General transcription factor IIB.
   
 
 0.877
GTF2A1L
General transcription factor IIA subunit 1 like.
   
 
 0.855
NUBPL
Nucleotide binding protein like.
      
 0.850
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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