Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100153446Alpha-amylase. (500 aa)    
Predicted Functional Partners:
AMY2
Pancreatic alpha-amylase.
  
 
0.876
LOC100153854
Alpha-amylase.
  
 
0.876
LOC110258046
Alpha-amylase.
  
 
 
0.875
I3LLP2_PIG
Alpha-amylase.
  
 
 
0.875
SI
Sucrase-isomaltase, intestinal; Plays an important role in the final stage of carbohydrate digestion. Isomaltase activity is specific for both alpha-1,4- and alpha-1,6-oligosaccharides (By similarity).
  
 
 0.812
LOC100521789
Pancreatic alpha-amylase.
  
 
  
0.801
LOC100621820
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.789
LOC100739735
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.788
CTRB2
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.784
GBE1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.760
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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