Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FANCM | RTL6 | ENSSSCP00000021205 | ENSSSCP00000000023 | FA complementation group M. | Retrotransposon Gag-like protein 6. | 0.622 |
FANCM | RTL9 | ENSSSCP00000021205 | ENSSSCP00000027102 | FA complementation group M. | Retrotransposon Gag like 9. | 0.622 |
NR0B1 | RTL9 | ENSSSCP00000012986 | ENSSSCP00000027102 | Nuclear receptor subfamily 0 group B member 1; Orphan nuclear receptor. Component of a cascade required for the development of the hypothalamic-pituitary-adrenal-gonadal axis. Acts as a coregulatory protein that inhibits the transcriptional activity of other nuclear receptors through heterodimeric interactions. May also have a role in the development of the embryo and in the maintenance of embryonic stem cell pluripotency (By similarity). Belongs to the nuclear hormone receptor family. NR0 subfamily. | Retrotransposon Gag like 9. | 0.444 |
RTL6 | FANCM | ENSSSCP00000000023 | ENSSSCP00000021205 | Retrotransposon Gag-like protein 6. | FA complementation group M. | 0.622 |
RTL6 | RTL9 | ENSSSCP00000000023 | ENSSSCP00000027102 | Retrotransposon Gag-like protein 6. | Retrotransposon Gag like 9. | 0.465 |
RTL9 | FANCM | ENSSSCP00000027102 | ENSSSCP00000021205 | Retrotransposon Gag like 9. | FA complementation group M. | 0.622 |
RTL9 | NR0B1 | ENSSSCP00000027102 | ENSSSCP00000012986 | Retrotransposon Gag like 9. | Nuclear receptor subfamily 0 group B member 1; Orphan nuclear receptor. Component of a cascade required for the development of the hypothalamic-pituitary-adrenal-gonadal axis. Acts as a coregulatory protein that inhibits the transcriptional activity of other nuclear receptors through heterodimeric interactions. May also have a role in the development of the embryo and in the maintenance of embryonic stem cell pluripotency (By similarity). Belongs to the nuclear hormone receptor family. NR0 subfamily. | 0.444 |
RTL9 | RTL6 | ENSSSCP00000027102 | ENSSSCP00000000023 | Retrotransposon Gag like 9. | Retrotransposon Gag-like protein 6. | 0.465 |
RTL9 | SHROOM1 | ENSSSCP00000027102 | ENSSSCP00000015198 | Retrotransposon Gag like 9. | Shroom family member 1. | 0.507 |
SHROOM1 | RTL9 | ENSSSCP00000015198 | ENSSSCP00000027102 | Shroom family member 1. | Retrotransposon Gag like 9. | 0.507 |