Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CPT1BCarnitine O-palmitoyltransferase 1, muscle isoform. (807 aa)    
Predicted Functional Partners:
ACACB
Biotin carboxylation domain-containing protein.
     
 0.948
CPT2
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.945
ACSL1
Acyl-CoA synthetase long chain family member 1.
   
 
 0.943
CPT1A
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
     
  0.919
CPT1C
Carnitine palmitoyltransferase 1C; Belongs to the carnitine/choline acetyltransferase family.
     
  0.919
ACSL3
Acyl-CoA synthetase long chain family member 3.
   
 
 0.908
ACSBG1
Acyl-CoA synthetase bubblegum family member 1.
   
 
 0.907
ACSL5
Acyl-CoA synthetase long chain family member 5.
   
 
 0.888
ACSL4
Acyl-CoA synthetase long chain family member 4.
   
 
 0.883
ACSL6
Long-chain-fatty-acid--CoA ligase 6 isoform X1.
   
 
 0.883
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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