STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPT1BCarnitine O-palmitoyltransferase 1, muscle isoform. (807 aa)    
Predicted Functional Partners:
ACSBG1
Acyl-CoA synthetase bubblegum family member 1.
   
 
 0.944
ACACB
Biotin carboxylation domain-containing protein.
     
 0.933
CPT2
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.933
ACSL3
Acyl-CoA synthetase long chain family member 3.
   
 
 0.930
ACSL4
Acyl-CoA synthetase long chain family member 4.
   
 
 0.928
ACSL5
Acyl-CoA synthetase long chain family member 5.
   
 
 0.921
ACSL6
Long-chain-fatty-acid--CoA ligase 6 isoform X1.
   
 
 0.920
ACSBG2
Acyl-CoA synthetase bubblegum family member 2.
   
 
 0.909
CPT1A
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
  
  
0.904
CPT1C
Carnitine palmitoyltransferase 1C; Belongs to the carnitine/choline acetyltransferase family.
  
  
 
0.903
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.