Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSMBBeta-microseminoprotein. (122 aa)    
Predicted Functional Partners:
ACPP
Acid phosphatase, prostate; Belongs to the histidine acid phosphatase family.
    
 
 0.818
CAMTA2
Calmodulin binding transcription activator 2.
      
 0.661
SMAP1
Small ArfGAP 1.
      
 0.649
TSACC
TSSK6-activating co-chaperone protein isoform c.
      
 0.640
ZNF628
Zinc finger protein 628.
      
 0.640
TCEAL4
Uncharacterized protein.
      
 0.640
ARMH4
Armadillo like helical domain containing 4.
      
 0.640
CCDC80
Coiled-coil domain containing 80.
      
 0.594
RPL7A
60S ribosomal protein L7a.
      
 0.594
CTSH
Cathepsin H heavy chain; Important for the overall degradation of proteins in lysosomes; Belongs to the peptidase C1 family.
   
  
 0.560
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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