STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JADE3Jade family PHD finger 3. (833 aa)    
Predicted Functional Partners:
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.890
MEAF6
MYST/Esa1 associated factor 6.
    
 0.851
ING5
Inhibitor of growth family member 5.
    
 0.707
ING4
Inhibitor of growth family member 4.
    
 0.693
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 
 0.600
TRIM66
Tripartite motif containing 66.
      
 0.548
AARSD1
Alanyl-tRNA editing protein Aarsd1.
    
 
 0.535
GRIK5
Glutamate ionotropic receptor kainate type subunit 5.
      
 0.515
RFX1
Regulatory factor X1.
      
 0.502
RNF150
Ring finger protein 150.
      
 0.487
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.