STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A7Solute carrier family 38 member 7. (462 aa)    
Predicted Functional Partners:
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.685
COPS7A
COP9 signalosome subunit 7A.
      
 0.684
PRDM13
PR/SET domain 13.
    
 
 0.674
ARL15
ADP ribosylation factor like GTPase 15.
      
 0.651
CNOT1
CCR4-NOT transcription complex subunit 1.
      
 0.627
ADGRL2
Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.616
CFAP20
Transmembrane and TPR repeat-containing protein 3.
      
 0.611
SLC7A4
Cationic amino acid transporter 4.
   
 
 0.605
CARHSP1
Calcium regulated heat stable protein 1.
   
  
 0.590
SLC7A8
Large neutral amino acids transporter small subunit 2 isoform a.
   
 
 0.580
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.