STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDST1Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2. (882 aa)    
Predicted Functional Partners:
EXTL3
Exostosin like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
   
  
 0.834
EXT1
Exostosin glycosyltransferase 1; Belongs to the glycosyltransferase 47 family.
   
  
 0.825
HS2ST1
Uncharacterized protein.
   
 
 0.785
EXT2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
    
 
 0.771
HS6ST1
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.767
GLCE
Glucuronic acid epimerase.
   
 
 0.720
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.718
XYLT2
Xylosyltransferase 2.
      
 0.686
SLC35B2
Solute carrier family 35 member B2.
      
 0.678
SDC4
Syndecan-4; Cell surface proteoglycan that bears heparan sulfate. Regulates exosome biogenesis in concert with SDCBP and PDCD6IP. Belongs to the syndecan proteoglycan family.
     
 0.677
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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