STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDKAL1CDK5 regulatory subunit associated protein 1 like 1. (600 aa)    
Predicted Functional Partners:
HHEX
Hematopoietically-expressed homeobox protein HHEX.
      
 0.770
TMEM38B
Trimeric intracellular cation channel type B.
   
  
 0.730
TTC6
TPR_REGION domain-containing protein.
     
 0.728
EXOSC3
Exosome complex component RRP40 isoform 1.
   
 
 0.715
MOCS1
Molybdenum cofactor synthesis 1.
      
 0.698
UROD
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
 
 0.648
ENDOV
Endonuclease V.
   
 
 0.648
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
   
 
 0.621
FTO
FTO_NTD domain-containing protein.
   
  
 0.620
REC114
Meiotic recombination protein REC114 isoform 1.
     
 0.618
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.