STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIRTPhosphoinositide interacting regulator of transient receptor potential channels. (135 aa)    
Predicted Functional Partners:
STARD10
StAR related lipid transfer domain containing 10.
      
 0.868
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.689
CAMK1G
Calcium/calmodulin dependent protein kinase IG.
      
 0.684
RASD2
RASD family member 2.
      
 0.652
CAMK1
Calcium/calmodulin dependent protein kinase I; Belongs to the protein kinase superfamily.
      
 0.611
VPS11
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
      
 0.609
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.580
GOLGA1
Golgin A1.
      
 0.570
WIPI2
WD repeat domain, phosphoinositide interacting 2.
      
 0.562
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.561
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.