STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEX11Testis expressed 11. (925 aa)    
Predicted Functional Partners:
SHOC1
Shortage in chiasmata 1.
    
 
 0.910
RNF212
RING-type domain-containing protein.
    
 
 0.891
MCMDC2
Minichromosome maintenance domain containing 2.
   
  
 0.886
MSH4
MutS homolog 4.
   
  
 0.858
RNF212B
Ring finger protein 212B.
    
 
 0.811
HFM1
Helicase for meiosis 1.
   
 
 0.755
ENOSF1
Mitochondrial enolase superfamily member 1 isoform rTSbeta.
      
 0.750
HPS3
Hermansky-Pudlak syndrome 3 protein homolog; Involved in early stages of melanosome biogenesis and maturation.
      
 0.701
SLC22A13
Solute carrier family 22 member 13.
      
 0.645
REC8
Meiotic recombination protein REC8 homolog.
   
  
 0.629
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.