STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELF2Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
HNRNPC
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.
   
 
 0.640
DCLK3
Doublecortin like kinase 3.
      
 0.616
NEDD1
NEDD1 gamma-tubulin ring complex targeting factor.
      
 0.604
MEGF8
Multiple EGF like domains 8.
      
 0.601
MBNL1
Muscleblind like splicing regulator 1.
   
 
 0.591
RIMKLB
Ribosomal modification protein rimK like family member B.
      
 0.555
MEX3A
Mex-3 RNA binding family member A.
    
 
 0.553
SBF1
SET binding factor 1.
      
 0.552
PRTG
Protogenin.
      
 0.551
MBNL2
Muscleblind like splicing regulator 2.
   
 
 0.549
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.