STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RD3Retinal degeneration 3, GUCY2D regulator. (195 aa)    
Predicted Functional Partners:
PRCD
Photoreceptor disc component.
      
 0.778
RPGRIP1
RPGR interacting protein 1.
      
 0.774
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
      
 0.763
STK38L
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.673
BEST1
Bestrophin-1; Forms calcium-sensitive chloride channels. Permeable to bicarbonate (By similarity); Belongs to the bestrophin family.
      
 0.662
CCDC66
Coiled-coil domain containing 66.
      
 0.662
SUCO
SUN domain containing ossification factor.
      
 0.659
MAPT
Microtubule-associated protein.
    
 
 0.658
NT5C
5', 3'-nucleotidase, cytosolic.
      
 0.648
AIPL1
Aryl hydrocarbon receptor interacting protein like 1.
      
 0.632
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.