STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO4A1Solute carrier organic anion transporter family member. (829 aa)    
Predicted Functional Partners:
SLC16A2
Solute carrier family 16 member 2.
     
 0.670
SLC16A10
Solute carrier family 16 member 10.
      
 0.571
SLC22A3
Solute carrier family 22 member 3.
   
  
 0.561
SLC22A4
Solute carrier family 22 member 4.
   
  
 0.532
B3GNT7
Hexosyltransferase.
      
 0.518
SLC22A11
Solute carrier family 22 member 11.
   
  
 0.510
SNRNP27
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein.
      
 0.501
SLC22A2
Solute carrier family 22 member 2; Mediates tubular uptake of organic compounds from circulation. Mediates the influx of agmatine, dopamine, noradrenaline (norepinephrine), serotonin, choline, famotidine, ranitidine, histamine, creatinine, amantadine, memantine, acriflavine, 4-[4- (dimethylamino)-styryl]-N-methylpyridinium ASP, amiloride, metformin, N-1-methylnicotinamide (NMN), tetraethylammonium (TEA), 1-methyl-4- phenylpyridinium (MPP), cimetidine, cisplatin and oxaliplatin. Cisplatin may develop a nephrotoxic action. Transport of creatinine is inhibited by fluoroquinolones such as [...]
   
  
 0.493
SLC10A6
Solute carrier family 10 member 6.
   
  
 0.492
FNIP1
Folliculin interacting protein 1.
   
  
 0.488
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.