STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A6Solute carrier family 27 member 6. (655 aa)    
Predicted Functional Partners:
BBS7
Bardet-Biedl syndrome 7.
   
 
 0.722
BBS9
Protein PTHB1 isoform X1.
   
 
 0.607
BBS1
Bardet-Biedl syndrome 1 protein.
   
 
 0.607
TTC8
Tetratricopeptide repeat domain 8.
   
 
 0.566
LPIN1
Lipin 1.
      
 0.555
BBS4
Uncharacterized protein.
   
 
 0.552
ACSL1
Acyl-CoA synthetase long chain family member 1.
   
 
 0.540
AWAT2
Acyl-CoA wax alcohol acyltransferase 2.
   
 
 0.523
BTN1A1
Butyrophilin subfamily 1 member A1.
      
 0.520
NAA40
N(alpha)-acetyltransferase 40, NatD catalytic subunit.
      
 0.509
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.