STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSTACystatin-A8; This is an intracellular thiol proteinase inhibitor; Belongs to the cystatin family. (103 aa)    
Predicted Functional Partners:
SEC24A
SEC24 homolog A, COPII coat complex component.
    
 
 0.744
C1orf210
Type III endosome membrane protein TEMP.
    
 
 0.615
RANGAP1
Ran GTPase activating protein 1.
   
 
 0.582
CTSB
Cathepsin B heavy chain; Thiol protease which is believed to participate in intracellular degradation and turnover of proteins (By similarity). Cleaves matrix extracellular phosphoglycoprotein MEPE (By similarity). Involved in the solubilization of cross-linked TG/thyroglobulin in the thyroid follicle lumen (By similarity). Has also been implicated in tumor invasion and metastasis (By similarity).
   
 
 0.557
SLC39A14
Solute carrier family 39 member 14.
      
 0.555
SAL1
Salivary lipocalin; Binds pheromones, the pheromones are released from the saliva of males and affect the sexual behavior of females.
      
 0.550
HEXD
Glyco_hydro_20 domain-containing protein.
      
 0.547
RARS2
Arginyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.540
BTBD10
BTB/POZ domain-containing protein 10 isoform X2.
      
 0.510
SEPTIN8
Septin 8; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
      
 0.510
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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